File(s) not publicly available
Estimating the number of double-strand breaks formed during meiosis from partial observation
journal contribution
posted on 2023-06-08, 15:02 authored by Hiroshi Toyoizumi, Hideo TsubouchiAnalyzing the basic mechanism of DNA double-strand breaks (DSB) formation during meiosis is important for understanding sexual reproduction and genetic diversity. The location and amount of meiotic DSBs can be examined by using a common molecular biological technique called Southern blotting, but only a subset of the total DSBs can be observed; only DSB fragments still carrying the region recognized by a Southern blot probe are detected. With the assumption that DSB formation follows a nonhomogeneous Poisson process, we propose two estimators of the total number of DSBs on a chromosome: (1) an estimator based on the Nelson-Aalen estimator, and (2) an estimator based on a record value process. Further, we compared their asymptotic accuracy.
History
Publication status
- Published
Journal
Journal of Computational BiologyISSN
1066-5277Publisher
Mary Ann LiebertExternal DOI
Issue
12Volume
19Page range
1277-1283Department affiliated with
- Sussex Centre for Genome Damage Stability Publications
Full text available
- No
Peer reviewed?
- Yes